PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN37819.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 353aa    MW: 39390.1 Da    PI: 6.7493
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN37819.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.82.2e-14162208354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  KHN37819.1 162 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 208
                 79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.907159208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000108.6E-12162208IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.1E-15163217IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.16E-14163215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.0E-13165214IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.32E-5172211No hitNo description
CDDcd048732.43E-6245291No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MIQEDQGQCS SQAINNYHQA YQEQLLLQQQ MQQQQQNNDI FGGGGGLNMY PGAEVSPIMN  60
HHHQPWSMTM PHHHHHHQVH DPFLVPPQPS PYASLFNRRG PSLHQFAYDH HGSSSDHLRI  120
ISESLVGPVV QPGSAVPFGL QTELAKMTAQ EIMEAKALAA SKSHSEAERR RRERINNHLA  180
KLRSLLPSTT KTDKASLLAE VIQHVKELKR QTSVIAETSP VPTEADELTV VDEADEDGNS  240
VIKASLCCED RSDLFPELIK TLKALRLRTL KAEITTLGGR VKNVLFITGE EADSSSGSTE  300
DHSHHHHQQQ QQQYCINSIQ EALKAVMEKS VGDHHESASA NIKRQRTNII SMS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1167172ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJQ0836630.0JQ083663.1 Glycine max cultivar Tamba bHLH mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003536319.10.0PREDICTED: transcription factor bHLH30
RefseqXP_006589385.10.0PREDICTED: transcription factor bHLH30
SwissprotQ9S7Y11e-100BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0B2S0870.0A0A0B2S087_GLYSO; Transcription factor bHLH30
TrEMBLH2EUM80.0H2EUM8_SOYBN; BHLH (Fragment)
STRINGGLYMA10G34910.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45893458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.17e-82bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]